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The 3D CBCA(CO)NH experiment is specifically designed to correlate the 1H and 15N amide resonances of one residue with both 13CA and 13CB resonances of its preceding residue via the intervening 13CO spin by means of the 1J(NH), 1J(N,CO), 1J(CA,CO) and optional 1J(CA,CB) coupling constants. A closely related experiment is the 3D HBHA(CO)NH experiment.REQUIREMENTS
Implementation on AVANCE spectrometers equipped with a third channel. Improved versions using pulsed field gradients (PFGs) are also available and, therefore, in such cases gradient technology is required.VERSIONSThe experiment is applied on 15N,13C-labeled proteins. Because the amide (NH) protons are involved, the CBCA(CO)NH experiment must be recorded in H2O.
The original 3D CBCA(CO)NH pulse sequence ( 92JACS6291 ) consisted of the following steps:EXPERIMENTAL DETAILS
Several improved versions have been proposed incorporating the following modifications:
- Initial transfer from 1H to 13C via 1J(CH) using an INEPT pulse sequence.
- 13C chemical shift evolution during a constant-time t1 period of duration 1/(4*J(CC)). followed by a A 90º 13C pulse to transfer magnetization from 13CB to 13CA.
- Fixed evolution delay to achieve antiphase 13CA magnetization with respect to 13CO via 1J(CA,CO) followed by magnetization transfer to 13CO by simultaneous 90º 13C and 13CO pulses.
- Fixed evolution delay to achieve antiphase 13CO magnetization with respect to 15N via 1J(N,CO) followed by magnetization transfer to 15N by simultaneous 90º 15N and 13CO pulses.
- 15N chemical shift evolution during the constant-time t2 period. Finally, the magnetization is transferred back to the NH protons by a retro-INEPT pulse train and proton acquisition is recorded under 15N decoupling.
- Substitution of the first INEPT transfer by a NOE-enhanced version ( 93JB185 and 95JACS4187 ).
- Improved sensitivity incorporating the PEP methodology in gradient-enhanced versions ( 94JMRB203-103 , 95JACS4187 , 93JB185 , and 96JB345 ) and combined with simultaneous 1H and 13C constant-time periods ( 99JMR437-137 ).
- A related 3D [HAHB-CACB](CO)NH experiment has been proposed that uses the so-called projection or reduced-dimensionality technique ( 94JMRB188-105 ). In this experiment, the information of 3D CBCA(CO)NH and 3D HBHA(CO)NH experiments is mixed in a single experiment. Thus, from the F1 dimension of the resulting 3D spectrum, the HB, HA, CB and CA chemical shifts of the preceding residue of a 1H-15N amide pair can be extracted.
- Related 3D HN(CO)CACB experiments have been also proposed ( 94JACS11655 ).
- Beta carbon-edited 2D (CBCACO)NH experiment to identify specific amino acids sequencing.
- A similar experiment ( 3D (H)CC(CO)NH experiment) allows to transfer magnetization to all side chain carbon resonances by using and isotropic 13C mixing instead of a 90º COSY-type pulse
- A 3D (H)CBCA(CO-TOCSY)NH experiment has been proposed for flexible polypeptides ( 00JB127 ).
- Improved sensitivity and resolution using the TROSY approach ( 99JACS844 ).
- In overlapped spectra it could be advisable to record a slightly modified 3D CBCACO(N)H experiment ( 01JMR246-153 ):
More details on practical implementation of the 3D CBCA(CO)NH experiment on AVANCE spectrometers can be found in the corresponding Tutorial 3D CBCA(CO)NH experimentSPECTRA
The CBCA(CO)NH experiment affords a 3D spectrum in which 1H, 15N and 13CA/13CB chemical shifts are displayed in three independent dimensions. Sequential connectivities are due to 1J(NH) + 1J(N,CO) + 1J(CA,CO) + optional 1J(CA,CB).RELATED TOPICS
See list of 3D triple-resonance NMR experiments for doubly-labeled proteins.