Hydrogen Bonding 
Hydrogen bonds are of fundamental importance in stabilizing biomolecular structures. NMR evidence for the existence of hydrogen bonds in biomolecules ( 99MFC961 ) can be ascertained from:
  • Water-protein interactions
  • The effect of deuterium exchange by determining:
  • Reduced hydrogen exchange rates with the solvent.
  • Isotope shift effects upon substitution with 2H or 3H.
  • Amide hydrogen D/H fractionation factor ( 94BIO1029 and 96JACS12864)
  • Deuterium quadrupolar coupling constants ( 97JMR61-124, 97JMR54-127)
  • Amide proton temperature coefficients (01JB249-21)
  • Effect on isotropic ( 83JACS5948, 92JACS4320, 93SCI1491) and anisotropic chemical shifts ( 97JACS8076, 97JACS8985).
  • Sequential 1JCO,N coupling constants ( 95JACS405, 96JACS7859, and 98JB1-11 ).
  • Scalar coupling constants measured through hydrogen bonds
  • Cross-correlation between CSA(1H) and DD(NH) ( 01JMR149-149)
  • On the other hand, the hydrogen bonding pattern can also give useful information about the secondary structure of proteins:
  • 310-helix: i__>i+3 hydrogen bonding
  • Alpha helix: i__>i+4 hydrogen bonding
  • Examples:

  • Temperature-dependence of protein hydrogen bonding parameters as cross-hydrogen scalar couplings 3hJ(NCO), chemical shifts, amide proton exchange rates, 15N relaxation parameters as well as 1J(N-CO) and 1J(NH) coupling constants (02JMB739).
  • Hydrogen bonds in serine protease active sites (01MRCS199)