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2D HNN-COSY

DESCRIPTION
The ge-2D HNN-COSY experiment has been developed for direct observation of hydrogen bonds in 15N-labeled nucleic acid base pairs by internucleotide 2J(N,N) couplings

REQUIREMENTS
Implementation on AVANCE spectrometers equipped with gradient technology.

VERSIONS
This experiment was originally described in 98JACS8293 for Watson-Crick base pairs in RNA

Cross-hydrogen bond 2hJN,N coupling constants, ranging from +6 to +10 Hz, has also been measured in:

  • Hoogsteen base pairs in RNA ( 98JACS8293 and 98PNAS14147)
  • DNA ( 99JB67, 99JACS6019 and 00JB279)
  • DNA-protein complex ( 00JB39).
  • Between NH.....N sidechain of histidines in a protein. ( 99JACS5123)
  • A related sequence has been proposed for the measurement of H....H/H-N hydrogen bond length in double stranded DNA from 1J(NH) dipolar couplings ( 01JB361-19).
  • A suite of 2HJNN schemes have been proposed to correlate proton-proton systems across NH........N hydrogen bonds in nucleic acids ( 01JB289-21). These sequences affords H(NN)H correlations in several types of RNA, DNA and peptide-RNA complexes.
  • A modified TROSY experiment has also been proposed ( 02JB31-24)
  • EXPERIMENTAL DETAILS
    SPECTRA
    A 2D 1H-15N spectrum is obtained

    RELATED TOPICS
     
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