It has been proposed several NMR methods to study sidechain dynamics in proteins. In one such approach, proteins are uniformly labeled with 13C (and/or 15N) and fractionally deuterated, allowing measurement of relaxation rates of deuterons in, for instance, CH2D and CHD2 systems. 2H relaxation is governed mainly by quadrupolar interaction and is insensitive to interactions with surrounding nuclei.
- Model selection for the interpretation of protein side chain methyl dynamics from 2H and 13C relaxation data (03JB325-25).
- Measurement of side-chain dynamics of methyl groups from 2H-based relaxation experiments ( 96BIO361 , 95JACS11536 , 97JB283 , 99JACS2891 , 99JB181-13 ). Applications have been reported to study the hydrophobic core packing ( 99JB135 ).
- 2H T1 (CzDz) and 2H T1ro (CzDy) of CHD methylene groups in 15N, 13C, and 50%-2H-labeled proteins ( 98JMB939-276 ).
- 13C T1 and T2 relaxation times in deuterated methylene carbon systems ( 93JACS11026 ).
- Measurement of 2H T1 and T1(ro) relaxation times at all methyl positions in fractionally 2H-labeled proteins ( 95JACS11536 ).
- Measurement of 2H relaxation rates in 1H-15N-2H systems ( 97JACS3842 ).
- Measurement of 13CA T1(ro) and T2 relaxation times for 13CA-2H spin systems ( 94JACS11655 ).
- Effects of cross correlation and cross relaxation on 2H relaxation methods ( 96JMRB213-110 ).
- Measurement of 1H and 13C relaxation rates of 13CHD2 isotopomers and 2H relaxation rates of 13CH2D isotopomers using a simple perdeuterated proteins. ( 01JACS6164 )
- New experiments to measure five relaxation rates in CH2D methyl groups in fractionally deuterated proteins and application to side-chain dynamics ( 02JACS6439 and 02JACS6449 )
- Side-chain dynamics in unfolded protein states ( 03JACS1748 )
Written by Teodor Parella Copyright © 1998-2008 BRUKER Biospin. All rights reserved. |